BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A01SP1|AL427232
(697 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1289 1317 0.0
>3x_Contig1289
Length = 5567
Score = 1317 bits (661), Expect = 0.0
Identities = 685/697 (98%)
Strand = Plus / Minus
Query: 1 atctaaattatcgattcggcgaaccgcacctcgccgatgatgttattcacgactacttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4817 atctaaattatcgattcggcgaaccgcacctcgccgatgatgttattcacgactacttgc 4758
Query: 61 aacctgcatagatctggttagctatgcttgtgatgattactgaaatcataatcattttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4757 aacctgcatagatctggttagctatgcttgtgatgattactgaaatcataatcattttca 4698
Query: 121 acggacatgctcatacttaaggacttacagtttgaaagttaaaatttaaggcattataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4697 acggacatgctcatacttaaggacttacagtttgaaagttaaaatttaaggcattataaa 4638
Query: 181 cgttgaaaagctgtwatctttaaacacaatcttagagtaaaacgagtggcaaacacaaat 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4637 cgttgaaaagctgtaatctttaaacacaatcttagagtaaaacgagtggcaaacacaaat 4578
Query: 241 tgcaagggctttccgatccaatagtggtatttaagatagaagacacgaattatcattcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4577 tgcaagggctttccgatccaatagtggtatttaagatagaagacacgaattatcattcat 4518
Query: 301 ttgagaaggtactgataccataattccttataattgccactagaaagttaactatctctt 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4517 ttgagaaggtactgataccataattccttataattgccactagaaagtaaactatctctt 4458
Query: 361 gggatttanaagaataagagaagcgttaawdactaaaganaaactaacctatactgtgaa 420
|||||| | |||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 4457 gggattaaaaagaataagagaagcgttaaaaactaaagaaaaactaacctatactgtaaa 4398
Query: 421 ggatgagtgctgttcaaatttcgagtattcctttgacgagccatgactctggtatcaagc 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4397 ggatgagtgctgtacaaatttcgagtattcctttgacgagccatgactctggtatcaagc 4338
Query: 481 ctttctttgaccaaaawatccaggaaagtgagcttaggatcagagaaaagacatcgaatt 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4337 ctttctttgaccaaaaaatccaggaaagtgagcttaggatcagagaaaagacatcgaatt 4278
Query: 541 tgcgtagactagaggctcaaagaaatgcgttgaatgataaggtcagatttataawggatg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4277 tgcgtagactagaggctcaaagaaatgcgttgaatgataaggtcagatttataaaggatg 4218
Query: 601 atttgaggctcttgcaggaatctggatcatacgtgggagaagtgttgaaagttatcagtg 660
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4217 aattgaggctcttgcaggaatctggatcatacgtgggagaagtgttgaaagttatcagtg 4158
Query: 661 agaaaaaagttttggtgaaagttcagcctgaaggaaa 697
|||||||||||||||||||||||||||||||||||||
Sbjct: 4157 agaaaaaagttttggtgaaagttcagcctgaaggaaa 4121
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4439
Number of Sequences: 1807
Number of extensions: 4439
Number of successful extensions: 91
Number of sequences better than 1.0e-20: 1
length of query: 697
length of database: 10,358,551
effective HSP length: 16
effective length of query: 681
effective length of database: 10,329,639
effective search space: 7034484159
effective search space used: 7034484159
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)